The detailed information of tRNA gene sequence


Sequence ID>C181203976
Genome IDLS398550
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398550]
Start position on genome 388471
End posion on genome 388545
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tgcaatacat
tRNA gene sequence 
TGGGACGTAGCCAAGCGGTAAGGCAACGGTTTTTGGTATCGTCATGCGGTGGTTCGATCC
CACCCGTCCCAGCCA
Downstream region at tRNA end position 
ttttagttta
Secondary structure (Cloverleaf model)
>C181203976	Gln	TTG
                   t      GCCA ttttagttta
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C T
                    T     C C A C C     A
        G A        A      | | | | |     G
      C     A C C G       G G T G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.-

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