The detailed information of tRNA gene sequence


Sequence ID>C181204003
Genome IDLS398550
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi [LS398550]
Start position on genome 710339
End posion on genome 710247
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaatcaaat
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTTAAGGCGGCGGTTTGCTAAACCGTTATACGGTTTAATATC
GTATCAAGGGTTCGAATCCCTTTCTCTCCACCA
Downstream region at tRNA end position 
gatctaaaga
Secondary structure (Cloverleaf model)
>C181204003	Ser	GCT
                   t      ACCA gatctaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TATACGGTTTAATATCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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