The detailed information of tRNA gene sequence


Sequence ID>C181204013
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 1147950
End posion on genome 1148025
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taagctatgc
tRNA gene sequence 
GAGCCTGTAGCTCAGCTGGTAGAGCACTTGACTTTTAATCAAGGTGTCCCGGGTTCGAAT
CCCGGCAGGCTCACCA
Downstream region at tRNA end position 
ttttaatata
Secondary structure (Cloverleaf model)
>C181204013	Lys	TTT
                   c      ACCA ttttaatata
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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