The detailed information of tRNA gene sequence


Sequence ID>C181204026
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 2173949
End posion on genome 2173861
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatttcaaat
tRNA gene sequence 
GGAAAAGTGGCCGAGTGGTTTAAGGCGCATGCCTGGAAAGCGTGTTTACGTTAACCGTAT
CAGGGGTTCAAATCCCCTCTTTTCCGCCA
Downstream region at tRNA end position 
tttatcattc
Secondary structure (Cloverleaf model)
>C181204026	Ser	GGA
                   t      GCCA tttatcattc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     A
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTACGTTAACCGTATC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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