The detailed information of tRNA gene sequence


Sequence ID>C181204028
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 2090008
End posion on genome 2089933
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttagtacat
tRNA gene sequence 
GGGCGATTAGTTCAGTTGGTAGAGCATCTCGTTTACACCGAGAAAGTCGGCAGTTCAAGT
CTGTCATCGCCCACCA
Downstream region at tRNA end position 
taatactatc
Secondary structure (Cloverleaf model)
>C181204028	Val	TAC
                   t      ACCA taatactatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     C T G T C     A
      T G A        A      | + | | |     A
    T       C T T G       G G C A G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     AAGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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