The detailed information of tRNA gene sequence


Sequence ID>C181204031
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 1475419
End posion on genome 1475329
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accaaagttt
tRNA gene sequence 
GGATAGATGTCCGAGTGGTTTAAGGAACCGGTCTTGAAAACCGGCGCTACAAGAAATTGT
ACCGTGGGTTCGAATCCCACTCTATCCGCCA
Downstream region at tRNA end position 
tataattcat
Secondary structure (Cloverleaf model)
>C181204031	Ser	TGA
                   t      GCCA tataattcat
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        A     CGCTACAAGAAATTGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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