The detailed information of tRNA gene sequence


Sequence ID>C181204035
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 1122945
End posion on genome 1122871
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataagtttaa
tRNA gene sequence 
CGCGGAGTAGAGCAGTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAGTC
CTATCTCCGCAACCA
Downstream region at tRNA end position 
ttatttcttg
Secondary structure (Cloverleaf model)
>C181204035	Met	CAT
                   a      ACCA ttatttcttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A T C C     A
        G A        A      | | | | |     A
      T     C G A G       A T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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