The detailed information of tRNA gene sequence


Sequence ID>C181204037
Genome IDLS398551
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Gilliam [LS398551]
Start position on genome 627179
End posion on genome 627103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttactatat
tRNA gene sequence 
AGGCCCATAGCTCAGTTGGTTAGAGCCCCTCGCTCATAACGAGGTTGTCACAGGTTCAAG
TCCTGTTGGGCCTACCA
Downstream region at tRNA end position 
gattttttgg
Secondary structure (Cloverleaf model)
>C181204037	Met	CAT
                   t      ACCA gattttttgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TTGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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