The detailed information of tRNA gene sequence


Sequence ID>C181213681
Genome IDLS483443
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter segnis ATCC 33393 NCTC10977 [LS483443]
Start position on genome 81211
End posion on genome 81300
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcctaatcac
tRNA gene sequence 
GGTGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGCGTGTATGTGGGAAACTGCA
TCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
ttcttaatga
Secondary structure (Cloverleaf model)
>C181213681	Ser	GGA
                   c      GCCA ttcttaatga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGTGGGAAACTGCATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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