The detailed information of tRNA gene sequence


Sequence ID>C181213682
Genome IDLS483443
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter segnis ATCC 33393 NCTC10977 [LS483443]
Start position on genome 423463
End posion on genome 423557
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttcgaaaa
tRNA gene sequence 
GGAAGATCGTCGTTTCCGGTGAAGCGGCAGGACTTCAAATCCTGTTGAGGCTGCCAGCAG
TCTCGGGTAGGTTCAACTCCTACGATCTTCCGCCA
Downstream region at tRNA end position 
atccatgtaa
Secondary structure (Cloverleaf model)
>C181213682	SeC	TCA
                   a      GCCA atccatgtaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     C A T C C     A
      C C T        T      | | | | |     A
    G       T T G C       G T A G G     C
    G       | + | |                 T T
    T       A G C G
      G A          G     TTGAGGCTGCCAGCAGTCTCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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