The detailed information of tRNA gene sequence


Sequence ID>C181220342
Genome IDLT703001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus sp. Alg231-15 [LT703001, LT703002]
Start position on genome 309795
End posion on genome 309871
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cggtgcataa
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttgcctcaat
Secondary structure (Cloverleaf model)
>C181220342	Asp	GTC
                   a      GCCA ttgcctcaat
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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