The detailed information of tRNA gene sequence


Sequence ID>C181220343
Genome IDLT703001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus sp. Alg231-15 [LT703001, LT703002]
Start position on genome 448294
End posion on genome 448370
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttgttctg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGGGGGTTCGAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
acctcttgta
Secondary structure (Cloverleaf model)
>C181220343	Met	CAT
                   g      ACCA acctcttgta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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