The detailed information of tRNA gene sequence


Sequence ID>C181220354
Genome IDLT703001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus sp. Alg231-15 [LT703001, LT703002]
Start position on genome 2329838
End posion on genome 2329913
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagcatgtgt
tRNA gene sequence 
AGGGGTGTAGCTCAGATGGTAGAGCGTCGGTCTCCAAAACCGAAGGCCCACGGTTCGATC
CCGTGCGCCCCTGCCA
Downstream region at tRNA end position 
cttttttcta
Secondary structure (Cloverleaf model)
>C181220354	Trp	CCA
                   t      GCCA cttttttcta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C T
                    T     G T G C C     A
      A G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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