The detailed information of tRNA gene sequence


Sequence ID>C181220355
Genome IDLT703001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus sp. Alg231-15 [LT703001, LT703002]
Start position on genome 2407231
End posion on genome 2407320
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atagcaatgc
tRNA gene sequence 
GGAGTCGTGGCAGAGTGGTCGATCGCGCACGCTTGGAAAGCGTGTATAGGGTTAAACCTA
TCGAGGGTTCGAATCCCTCCGACTCCGCCA
Downstream region at tRNA end position 
tttcagtttg
Secondary structure (Cloverleaf model)
>C181220355	Ser	GGA
                   c      GCCA tttcagtttg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TATAGGGTTAAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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