The detailed information of tRNA gene sequence


Sequence ID>C181226999
Genome IDLT907975
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesPseudodesulfovibrio profundus 500-1 [LT907975]
Start position on genome 3184811
End posion on genome 3184718
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catcaccaat
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCTTGGTCTTCAAAACCAATGTACGGCAGTGATGT
CGTAGGCAGGTTCGACCCCTGTACGCTTCCGCCA
Downstream region at tRNA end position 
ttgttaacaa
Secondary structure (Cloverleaf model)
>C181226999	SeC	TCA
                   t      GCCA ttgttaacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          C C
                    T     T G T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGTACGGCAGTGATGTCGTAG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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