The detailed information of tRNA gene sequence


Sequence ID>C181227223
Genome IDLT907989
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae A19 [LT907989, LT907990]
Start position on genome 550261
End posion on genome 550186
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacctaattt
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCCCCAGTTCGAAC
CTGGGAGGGGCCACCA
Downstream region at tRNA end position 
ctttctcttc
Secondary structure (Cloverleaf model)
>C181227223	Met	CAT
                   t      ACCA ctttctcttc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     G G G T C     A
      T G A        A      | | | | |     G
    G       C T C G       C C C A G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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