The detailed information of tRNA gene sequence


Sequence ID>C181227278
Genome IDLT960611
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio tapetis subsp. tapetis [LT960611]
Start position on genome 8256
End posion on genome 8340
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gccttaagat
tRNA gene sequence 
GCCGGTATGGTGAAATTGGTATACACGACGGATTCAAAATCCGTTGCCTTCGGGCGTGGC
GGTTCAAGTCCGCCTACCGGTACCA
Downstream region at tRNA end position 
tatttaaatg
Secondary structure (Cloverleaf model)
>C181227278	Leu	CAA
                   t      ACCA tatttaaatg
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C C G C C     A
      T A A        G      | | | | |     A
    T       A G T G       G G C G G     C
    G         | | |                 T T
    G       A C A C
      T A T        G     TGCCTTCGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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