The detailed information of tRNA gene sequence


Sequence ID>C193000547
Genome IDCP024960
Search identical group
Phylum/ClassActinomycetota
SpeciesCollinsella aerofaciens C11 [CP024960]
Start position on genome 1359388
End posion on genome 1359292
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgccgcactt
tRNA gene sequence 
GGGAACGGATGGGCTCCGGTGGGCTCCGCGGTCCTCAAAACCGTTGCGAGGCGTGCAAAA
CGTCTTGGATGTGTTCGATTCACATACGTTCCCGCCA
Downstream region at tRNA end position 
tacgctacca
Secondary structure (Cloverleaf model)
>C193000547	SeC	TCA
                   t      GCCA tacgctacca
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G   A          T T
                    A     T A C A C     A
      C C T        T      | | | | |     G
    G       C G G G       A T G T G     C
    G       | | + |                 T T
    T       G C T C
      G G          C     TGCGAGGCGTGCAAAACGTCTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  C       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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