The detailed information of tRNA gene sequence


Sequence ID>C191000390
Genome IDAP017626
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPleomorphomonas sp. SM30 [AP017626]
Start position on genome 2299670
End posion on genome 2299746
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgggcccgt
tRNA gene sequence 
GGCAGAGTAGCTCAGTTGGTTAGAGCGACGGACTCATAACCCGTAGGTCGGCGGTTCGAT
TCCGCCCTCTGCTACCA
Downstream region at tRNA end position 
tttctccccg
Secondary structure (Cloverleaf model)
>C191000390	Met	CAT
                   t      ACCA tttctccccg
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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