The detailed information of tRNA gene sequence


Sequence ID>C191000644
Genome IDAP017912
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeobacter sulfurreducens YM18 [AP017912]
Start position on genome 901965
End posion on genome 901868
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
agtctgtcgc
tRNA gene sequence 
GGAGGCACGTCGGTCGCTGGTGGGCCGCCCGGTCTTCAAAACCGGTGTGGGGGTTGAGAA
AACTCCCAGGTGGGTTCGATTCCCATGTGCCTCCGCCA
Downstream region at tRNA end position 
attatttcaa
Secondary structure (Cloverleaf model)
>C191000644	Sec	TCA
                   c      GCCA attatttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    G     T A C C C     A
      C G C        T      + | | | |     G
    T       T G G C       G T G G G     C
    G       + | | |                 T T
    G       G C C G
      T G G        C     TGTGGGGGTTGAGAAAACTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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