The detailed information of tRNA gene sequence


Sequence ID>C191002074
Genome IDAP018410
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium pseudoshottsii JCM 15466 [AP018410]
Start position on genome 308355
End posion on genome 308261
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tatggcccag
tRNA gene sequence 
GGAGGCGTCTCCGGTCTGGTGACCGGCGCGGTCTTCAAAACCGTCGAGCGACAGCTGCTG
CCGTTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
ccgcgccaat
Secondary structure (Cloverleaf model)
>C191002074	Sec	TCA
                   g      GCCA ccgcgccaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      T C T        T      + | | | |     G
    G       G G C C       G C G G G     C
    G       | | | |                 T T
    T       C C G G
      G A          C     CGAGCGACAGCTGCTGCCGTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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