The detailed information of tRNA gene sequence


Sequence ID>C191002148
Genome IDAP018437
Search identical group
Phylum/ClassChloroflexota
SpeciesPelolinea submarina MO-CFX1 [AP018437]
Start position on genome 2948769
End posion on genome 2948863
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tgcttagcct
tRNA gene sequence 
GGGGATGGTTGGGTCCCGGTGGGTCCCTCGATCTTCAAAATCGGTGGCGGGCTGCTCTGC
AGGCCGCGGTGGGTTCGACTCCCATCCATTCCCGCtg
Downstream region at tRNA end position 
gtgcaacgtt
Secondary structure (Cloverleaf model)
>C191002148	Sec	TCA
                   t      GCtg gtgcaacgtt
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGCGGGCTGCTCTGCAGGCCGCG
                    T + G
                    C - G
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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