The detailed information of tRNA gene sequence


Sequence ID>C191005680
Genome IDAP018907
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastochloris tepida GI [AP018907]
Start position on genome 3173501
End posion on genome 3173576
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gctgccaggt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGACT
CCCCTTGGCTCCACCA
Downstream region at tRNA end position 
aatttctttt
Secondary structure (Cloverleaf model)
>C191005680	Ala	GGC
                   t      ACCA aatttctttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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