The detailed information of tRNA gene sequence


Sequence ID>C191022824
Genome IDCP022927
Search identical group
Phylum/ClassActinomycetota
SpeciesMycobacterium shigaense SCY [CP022927]
Start position on genome 149200
End posion on genome 149295
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
gttgatgcgt
tRNA gene sequence 
GGAGGCGTTTGGGTTCCTGGTGGTCCCCCCGGTCTTCAAAACTGGTGAGGCCGAGCATCT
CGGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
gccgtgccga
Secondary structure (Cloverleaf model)
>C191022824	Sec	TCA
                   t      GCCA gccgtgccga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       T C C C
      T G G        C     TGAGGCCGAGCATCTCGGTCTG
                    C - G
                    C - G
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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