The detailed information of tRNA gene sequence


Sequence ID>C191029329
Genome IDCP024996
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum rubrisubalbicans DSM 11543 [CP024996]
Start position on genome 548664
End posion on genome 548740
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgatccaagc
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTGTTGATAACGCGGGGGTCGTTGGTTCGAG
CCCAACCAGACCCACCA
Downstream region at tRNA end position 
aggtttcggg
Secondary structure (Cloverleaf model)
>C191029329	Ile	GAT
                   c      ACCA aggtttcggg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          C G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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