The detailed information of tRNA gene sequence


Sequence ID>W141519846
Genome IDJGVF01000057
Search identical group
Phylum/ClassBacteroidota
SpeciesBacteroides fragilis str. 1007-1-F #6 [JGVF]
Start position on genome 305826
End posion on genome 305911
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgtagttct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGTACTGCGAGGTACC
CGGGGTTCGAATCCCTGTCTCTCCGCtg
Downstream region at tRNA end position 
aaaacaaaaa
Secondary structure (Cloverleaf model)
>W141519846	Ser	TGA
                   t      GCtg aaaacaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTACTGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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