The detailed information of tRNA gene sequence


Sequence ID>W141520667
Genome IDJGVZ01000142
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii CDC-H629-BH [JGVZ]
Start position on genome 17425
End posion on genome 17349
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgttctcttt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCGAGTTCGAA
TCCCGCCGTCCCGACCA
Downstream region at tRNA end position 
gaaagacaaa
Secondary structure (Cloverleaf model)
>W141520667	Pro	GGG
                   t      ACCA gaaagacaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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