The detailed information of tRNA gene sequence


Sequence ID>W141520788
Genome IDJGWC01000018
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii 04P3421 [JGWC]
Start position on genome 2421
End posion on genome 2332
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcgaatcaa
tRNA gene sequence 
GGAAGCGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCAAGGGTTTATACCCT
TCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
tacacactgt
Secondary structure (Cloverleaf model)
>W141520788	Ser	TGA
                   a      GCCA tacacactgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CAAGGGTTTATACCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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