The detailed information of tRNA gene sequence


Sequence ID>C191071838
Genome IDCP030126
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 [CP030126]
Start position on genome 609112
End posion on genome 609188
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcactggtgg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCCGGCCGCTCATAACGGTCTGGTTGCAGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
accctccctg
Secondary structure (Cloverleaf model)
>C191071838	Met	CAT
                   g      ACCA accctccctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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