The detailed information of tRNA gene sequence


Sequence ID>C191071852
Genome IDCP030126
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 [CP030126]
Start position on genome 3071244
End posion on genome 3071334
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgttccagc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCTCGCCTGGAAAGCGGGTATACGGCAAAACCGT
ATCGTGAGTTCGAATCTCATCCCCTCCGCCA
Downstream region at tRNA end position 
ctttcctttc
Secondary structure (Cloverleaf model)
>C191071852	Ser	GGA
                   c      GCCA ctttcctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGCAAAACCGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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