The detailed information of tRNA gene sequence


Sequence ID>C191071863
Genome IDCP030126
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 [CP030126]
Start position on genome 1790693
End posion on genome 1790602
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgacgcgcc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGGTAAAACCG
TATCGTGGGTTCGAATCCCATCCCCTCCGCCA
Downstream region at tRNA end position 
gttccaagca
Secondary structure (Cloverleaf model)
>C191071863	Ser	GCT
                   c      GCCA gttccaagca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGTAAAACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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