The detailed information of tRNA gene sequence


Sequence ID>C191071871
Genome IDCP030126
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 [CP030126]
Start position on genome 1382595
End posion on genome 1382519
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctcatatgga
tRNA gene sequence 
CTGGGTGTAGCGCAGCCTGGTAGCGCGCCTGCCTTGGACGCAGGAGGTCGCGAGTTCGAA
TCTCGCCACCCAGACCA
Downstream region at tRNA end position 
ccattgggac
Secondary structure (Cloverleaf model)
>C191071871	Pro	TGG
                   a      ACCA ccattgggac
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | | | | |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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