The detailed information of tRNA gene sequence


Sequence ID>C191072520
Genome IDCP030364
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber M1 [CP030364]
Start position on genome 2171987
End posion on genome 2171912
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccgcactc
tRNA gene sequence 
GCGGACGTAGCTCAACTGGGAGAGCAGCGGACTCCAAATCCGCCGGTTGGGGGTTCGAGT
CCTCCCGTCCGTGCCA
Downstream region at tRNA end position 
cactacgggc
Secondary structure (Cloverleaf model)
>C191072520	Trp	CCA
                   c      GCCA cactacgggc
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C C T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     CGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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