The detailed information of tRNA gene sequence


Sequence ID>W09102719
Genome IDAAIE01000064
Search identical group
Phylum/ClassActinomycetota
SpeciesFrankia casuarinae CcI3 [AAIE]
Start position on genome 3570
End posion on genome 3480
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctagtccgC
tRNA gene sequence 
GGTGGAGTCGCCTAGTGGCCGAGGGCGCACGCCTCGAAAGCGTGTGAGGGGGCAACCCCT
CCGTGGGTTCAAATCCCACCTCCACCGCCC
Downstream region at tRNA end position 
tagcggcacg
Secondary structure (Cloverleaf model)
>W09102719	Ser	CGA
                   C      GCCC tagcggcacg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G T G G G     C
    G       + | | |                 T T
    C       G G G C
      C G A        G     TGAGGGGGCAACCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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