The detailed information of tRNA gene sequence


Sequence ID>W09103819
Genome IDAAKZ01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodopseudomonas palustris BisB5 [AAKZ]
Start position on genome 279215
End posion on genome 279126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gttgcgccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATAGGTGCAAGCCTA
TCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcgatctagg
Secondary structure (Cloverleaf model)
>W09103819	Ser	CGA
                   c      GCCA gcgatctagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CATAGGTGCAAGCCTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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