The detailed information of tRNA gene sequence


Sequence ID>C191108618
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 145056
End posion on genome 145132
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgtagaaa
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
tttacttaca
Secondary structure (Cloverleaf model)
>C191108618	Asp	GTC
                   a      GCCA tttacttaca
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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