The detailed information of tRNA gene sequence


Sequence ID>C191108628
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1118527
End posion on genome 1118602
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggcgcaaat
tRNA gene sequence 
AGGAGTATAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCAAGT
CCTCTTGCTCCTGCCA
Downstream region at tRNA end position 
gatttacaag
Secondary structure (Cloverleaf model)
>C191108628	Trp	CCA
                   t      GCCA gatttacaag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T G
                    T     T C T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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