The detailed information of tRNA gene sequence


Sequence ID>C191108629
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1396355
End posion on genome 1396430
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttatttttg
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGTTAGAGCTGCCCGCTCATAACGGGTAGGTCGCTGGTTCAAGT
CCGGCCGGGCCCACCA
Downstream region at tRNA end position 
cctataaata
Secondary structure (Cloverleaf model)
>C191108629	Met	CAT
                   g      ACCA cctataaata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | + | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTC
                    G + T
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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