The detailed information of tRNA gene sequence


Sequence ID>C191108630
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1525070
End posion on genome 1525146
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttattgatgt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCAAC
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ttaaataaca
Secondary structure (Cloverleaf model)
>C191108630	Ile	GAT
                   t      ACCA ttaaataaca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T C
                    T     C C A C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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