The detailed information of tRNA gene sequence


Sequence ID>C191108632
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1701941
End posion on genome 1702017
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttcagtaatg
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGCGCTAGGTTGTGGTTCTGGAGGTCGCGAGTTCGAT
TCTCGTCGCTCGCCCCA
Downstream region at tRNA end position 
ttaatttttt
Secondary structure (Cloverleaf model)
>C191108632	His	GTG
                   g      CCCA ttaatttttt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T T
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T + G
                    A - T
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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