The detailed information of tRNA gene sequence


Sequence ID>C191108636
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1466723
End posion on genome 1466635
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttatttgatt
tRNA gene sequence 
GCCCCAGTGGTGGAATTGGTAGACGCGGCAGACTCAAAATCTGCTGTTCTTTGCGGAACG
TGCTGGTTCAAGTCCGGCCTGGGGCACCA
Downstream region at tRNA end position 
ccccttattt
Secondary structure (Cloverleaf model)
>C191108636	Leu	CAA
                   t      ACCA ccccttattt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | + | |     A
    T       G G T G       G C T G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TGTTCTTTGCGGAACGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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