The detailed information of tRNA gene sequence


Sequence ID>C191108638
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1083469
End posion on genome 1083380
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taccaaaaac
tRNA gene sequence 
GGATGGGTGGCCGAGTGGTTGAAGGCACCGGTCTTGAAAACCGGCGTGCGGGTGACCGTA
CCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
gcttcttatc
Secondary structure (Cloverleaf model)
>C191108638	Ser	TGA
                   c      GCCA gcttcttatc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGTGCGGGTGACCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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