The detailed information of tRNA gene sequence


Sequence ID>C191108640
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 1010288
End posion on genome 1010212
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gtttaattgg
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGTCACGTTGACATCGTGAAGGTCGGAAGTTCGAG
TCTTCTATCGCCCACCA
Downstream region at tRNA end position 
ctcaaaatca
Secondary structure (Cloverleaf model)
>C191108640	Val	GAC
                   g      ACCA ctcaaaatca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T C T T C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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