The detailed information of tRNA gene sequence


Sequence ID>C191108644
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 677357
End posion on genome 677268
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agctaaatta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCCCGCCTGGAAAGCGTGTTCATGCGAAAGTGTG
TCAAGGGTTCGAATCCCTTTCTCTCCGCCA
Downstream region at tRNA end position 
cctaaaattt
Secondary structure (Cloverleaf model)
>C191108644	Ser	GGA
                   a      GCCA cctaaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTCATGCGAAAGTGTGTC
                    C - G
                    C   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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