The detailed information of tRNA gene sequence


Sequence ID>C191108647
Genome IDCP033611
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsiales endosymbiont of Stachyamoeba lipophora RICK01 [CP033611]
Start position on genome 223814
End posion on genome 223738
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aagtgggtat
tRNA gene sequence 
CGGGGCATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGAA
TCTCTCTGCCCCGACCA
Downstream region at tRNA end position 
tttctaaagt
Secondary structure (Cloverleaf model)
>C191108647	Pro	TGG
                   t      ACCA tttctaaagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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