The detailed information of tRNA gene sequence


Sequence ID>W09106216
Genome IDAATW01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesNitratidesulfovibrio vulgaris subsp. vulgaris DP4 [AATW]
Start position on genome 210777
End posion on genome 210868
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtctcgcac
tRNA gene sequence 
GGAGAGGTGTCCGAGATGGCCGAAGGAGCACGATTGGAAATCGTGTGTACCCTAACCCGG
TACCGAGAGTTCGAATCTCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gattatcccc
Secondary structure (Cloverleaf model)
>W09106216	Ser	GGA
                   c      GCCA gattatcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T A G A        G      | | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  C         A G G A
    C G A          G     TGTACCCTAACCCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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