The detailed information of tRNA gene sequence


Sequence ID>W09107156
Genome IDABFI01000060
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobaculum sp. Y04AAS1 [ABFI]
Start position on genome 3581
End posion on genome 3492
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataacttca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCGGGTGATTTGAAATCATCAGTGGGTTCACGCCCA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaaatcctg
Secondary structure (Cloverleaf model)
>W09107156	Ser	TGA
                   a      GCCA taaaatcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     AGTGGGTTCACGCCCACC
                    G - C
                    G + T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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