The detailed information of tRNA gene sequence


Sequence ID>W09107414
Genome IDABIJ01000003
Search identical group
Phylum/ClassThermotogota
SpeciesThermotoga sp. RQ2 [ABIJ]
Start position on genome 33233
End posion on genome 33144
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatgacaggt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCCGAAGGCGCTTGCCTGCTAAGCAAGTGTGGGGGTTTCCCCA
CCGGGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttttttgta
Secondary structure (Cloverleaf model)
>W09107414	Ser	GCT
                   t      GCCA gttttttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      |   | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TGTGGGGGTTTCCCCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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