The detailed information of tRNA gene sequence


Sequence ID>W09109114
Genome IDABTW01000001
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [ABTW]
Start position on genome 1565599
End posion on genome 1565512
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgtgaccca
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGTGCCTGATTCGAAATCAGGTGTAGCGCGAGCTACC
GGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tattttttgt
Secondary structure (Cloverleaf model)
>W09109114	Ser	CGA
                   a      GCCA tattttttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTAGCGCGAGCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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