The detailed information of tRNA gene sequence


Sequence ID>W09109636
Genome IDABUK01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctopirus limnophila DSM 3776 [ABUK]
Start position on genome 1008640
End posion on genome 1008727
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattccttct
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGATTGTGCAGCACTGGAAATGCTGTGTACTCGAAAGGGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCtt
Downstream region at tRNA end position 
ggatgtaaca
Secondary structure (Cloverleaf model)
>W09109636	Ser	GGA
                   t      GCtt ggatgtaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    T       T T G T
      C G A        G     TGTACTCGAAAGGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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